Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015939290.1_cds_XP_016483945.1_75008
CDS Infomation

[gene=LOC107804548] [db_xref=GeneID:107804548] [protein=probable pectinesterase 53] [protein_id=XP_016483945.1] [location=join(37871..38205,38344..38533,38788..39230,39356..39506)] [gbkey=CDS]
Sequence

ATGGCTACTTCAAGGATGAGATTACTAGAGCTGCTTTTTATCTTAATGTTACTGTTTGCT
ATTAGGGCAAATGCTAAAAGGGGTAAGCATTCTAGGAGGCATAATAAGTTGAGGGTGGCT
AATGAAGATGGTTTCTTGAATTGGATTAATCTCATGAGTTCTCGCAATCATTCTGTATTC
CAAGAAGCGAAGAATAAATTTGAGCCTTGCAAATTTATTAAGGTGAATAAAAACCCAAAG
CATGGAGATTTTACTACGGTTCAAAAGGCTATTGACTCAATTCCGATAGTCAATTCTTGT
CGAGTGGTTATTTCTGTTAGTCCTGGGATTTACAGGGAGAAGATTGAAATTCCAGCAACA
ATGGCATACATTACACTGGAAGGTGCAGGTTCACGCAAAACAACTATCAAATGGGATGAC
ACTGCAGATAGGTTAGGAAAAGATGGCCAGCCAATGGGAACGTATGGTTCTGCAACTTTT
GCTGTTAATTCTCCCTACTTCATTGCCAAAAACATCACCTTTAAGAATGTAGCACCACCA
CCACCATCAGGGGCACTAGGAAAGCAAGCGGTGGCATTAAGAATCTCAGCAGACACAGCG
GCGTTTATAAATTGCAAATTCATTGGAGCACAAGATACACTGTATGATCACAGGGGTAGG
CATTATTTCAAGAACTGCTATATACAAGGTTCTGTGGATTTTATATTTGGAGATGGACTA
TCCCTCTATGAGAATTGTCATTTACATGCCAAAACAAAAAGTTATGGGGCATTGACAGCC
CAGAAGAGGGAGAGCATGCTAGAGGAAACTGGATTCTCTTTTGTGAATTGCAAGGTTACT
GGATCTGGTGCTCTTTACTTGGGCAGGGCTTGGGGTACTTTCTCAAGGGTCGTATTTGCT
TACACTTACATGGATAAGATCATCACTTCAAAGGGATGGTATGACTGGGGGGATAAGAAC
AGGCATATGACGGTATTTTATGGGCAATTCAAGTGTTCGGGACCAGGGGCAAACCACGGG
GGCAGGGTGAAATGGTCCAGGGAGCTCACTGAACAAGAAGCTAAACCGTTTGTATCACTC
AGCTTCATCGATGGTCATGAATGGCTTCTCAATATTTGA

Peptide Sequence

PEP ID

XP_016483945.1
PEP Infomation

PREDICTED: probable pectinesterase 53 [Nicotiana tabacum]
Sequence

MATSRMRLLELLFILMLLFAIRANAKRGKHSRRHNKLRVANEDGFLNWINLMSSRNHSVF
QEAKNKFEPCKFIKVNKNPKHGDFTTVQKAIDSIPIVNSCRVVISVSPGIYREKIEIPAT
MAYITLEGAGSRKTTIKWDDTADRLGKDGQPMGTYGSATFAVNSPYFIAKNITFKNVAPP
PPSGALGKQAVALRISADTAAFINCKFIGAQDTLYDHRGRHYFKNCYIQGSVDFIFGDGL
SLYENCHLHAKTKSYGALTAQKRESMLEETGFSFVNCKVTGSGALYLGRAWGTFSRVVFA
YTYMDKIITSKGWYDWGDKNRHMTVFYGQFKCSGPGANHGGRVKWSRELTEQEAKPFVSL
SFIDGHEWLLNI

Transcript Sequence

Gene sequence data has not been registered.